KarrLab / datanator_query_python / #139 / 3.6.8

Info

Statistics

  • Test classes: 28
  • Test cases: 113
  • Pass rate (%): 100.0
  • Time (s): 31.03

Test cases

Class Case File Line Result Time (s)
project.tests.test_core.CoreTestCase test_1 project/tests/test_core.py 18 Pass 0.001
project.tests.util.test_file_util.TestFileUtil test_access_dict_by_index project/tests/util/test_fil... 56 Pass 0.001
project.tests.config.test_config.TestConfig test_basic_config project/tests/config/test_c... 18 Pass 0.001
project.tests.test_main.CliTestCase test_cli project/tests/test_main.py 18 Pass 0.016
project.tests.test_main.CliTestCase test_command_1 project/tests/test_main.py 58 Pass 0.099
project.tests.test_main.CliTestCase test_command_3 project/tests/test_main.py 69 Pass 0.099
project.tests.util.test_mongo_util.TestMongoUtil test_con_db project/tests/util/test_mon... 35 Pass 0.004
project.tests.util.test_file_util.TestFileUtil test_distance_to_common project/tests/util/test_fil... 74 Pass 0.001
project.tests.query.test_query_nosql.TestQueryN... test_doc_feeder project/tests/query/test_qu... 28 Pass 0.038
project.tests.util.test_file_util.TestFileUtil test_exists_key_value_pair project/tests/util/test_fil... 121 Pass 0.001
project.tests.util.test_file_util.TestFileUtil test_extract_values project/tests/util/test_fil... 32 Pass 0.001
project.tests.config.test_query_manager.TestQue... test_eymdb_manager project/tests/config/test_q... 27 Pass 0.004
project.tests.query.test_query_sabiork.TestQuer... test_find_reaction_particip... project/tests/query/test_qu... 37 Pass 0.029
project.tests.util.test_file_util.TestFileUtil test_flatten_json project/tests/util/test_fil... 19 Pass 0.001
project.tests.config.test_config.TestConfig test_ftx_config project/tests/config/test_c... 32 Pass 0.001
project.tests.query.test_query_protein.TestQuer... test_get_abundance_by_id project/tests/query/test_qu... 175 Pass 0.127
project.tests.query.test_query_protein.TestQuer... test_get_abundance_by_ko project/tests/query/test_qu... 235 Pass 0.007
project.tests.query.test_query_protein.TestQuer... test_get_abundance_by_taxon project/tests/query/test_qu... 216 Pass 0.003
project.tests.query.test_query_pax.TestQueryPax test_get_abundance_from_uni... project/tests/query/test_qu... 36 Pass 2.818
project.tests.query.test_query_protein.TestQuer... test_get_abundance_with_sam... project/tests/query/test_qu... 226 Pass 0.010
project.tests.query.test_query_ecmdb.TestQueryC... test_get_all_concentrations project/tests/query/test_qu... 33 Pass 0.097
project.tests.query.test_query_pax.TestQueryPax test_get_all_species project/tests/query/test_qu... 32 Pass 0.229
project.tests.query.test_query_taxon_tree.TestQ... test_get_all_species project/tests/query/test_qu... 28 Skipped 0.003
project.tests.query.test_query_taxon_tree.TestQ... test_get_anc_by_id project/tests/query/test_qu... 62 Pass 0.037
project.tests.query.test_query_taxon_tree.TestQ... test_get_anc_by_name project/tests/query/test_qu... 56 Pass 0.005
project.tests.query.test_query_taxon_tree.TestQ... test_get_canon_rank_distance project/tests/query/test_qu... 82 Pass 0.142
project.tests.query.test_query_taxon_tree.TestQ... test_get_canon_rank_distanc... project/tests/query/test_qu... 90 Pass 0.134
project.tests.query.test_query_taxon_tree.TestQ... test_get_common_ancestor project/tests/query/test_qu... 69 Pass 0.003
project.tests.query.test_query_corum.TestQueryC... test_get_complexes_with_ncbi project/tests/query/test_qu... 41 Pass 0.072
project.tests.query.test_query_corum.TestQueryC... test_get_complexes_with_uni... project/tests/query/test_qu... 35 Pass 0.033
project.tests.query.test_query_intact_complex.T... test_get_complex_with_ncbi project/tests/query/test_qu... 32 Pass 0.100
project.tests.query.test_query_metabolites.Test... test_get_conc_from_inchi project/tests/query/test_qu... 34 Pass 0.183
project.tests.query.test_query_kegg_orthology.T... test_get_def_by_ko project/tests/query/test_qu... 39 Pass 0.033
project.tests.query.test_query_rna_halflife.Tes... test_get_doc_by_oln project/tests/query/test_qu... 24 Pass 0.036
project.tests.query.test_query_protein.TestQuer... test_get_equivalent_kegg_wi... project/tests/query/test_qu... 252 Pass 0.076
project.tests.query.test_query_protein.TestQuer... test_get_equivalent_protein project/tests/query/test_qu... 200 Pass 0.016
project.tests.query.test_query_protein.TestQuer... test_get_equivalent_protein... project/tests/query/test_qu... 207 Pass 0.016
project.tests.query.test_query_taxon_tree.TestQ... test_get_equivalent_species project/tests/query/test_qu... 135 Pass 0.135
project.tests.query.test_query_pax.TestQueryPax test_get_file_by_name project/tests/query/test_qu... 47 Pass 0.266
project.tests.query.test_query_pax.TestQueryPax test_get_file_by_ncbi_id project/tests/query/test_qu... 54 Pass 5.455
project.tests.query.test_query_pax.TestQueryPax test_get_file_by_organ project/tests/query/test_qu... 82 Pass 0.030
project.tests.query.test_query_pax.TestQueryPax test_get_file_by_publication project/tests/query/test_qu... 68 Pass 0.019
project.tests.query.test_query_pax.TestQueryPax test_get_file_by_quality project/tests/query/test_qu... 59 Pass 0.085
project.tests.query.test_query_uniprot.TestUniprot test_get_gene_name_by_locus project/tests/query/test_qu... 22 Pass 0.031
project.tests.query.test_query_uniprot.TestUniprot test_get_gene_protein_name_... project/tests/query/test_qu... 27 Pass 0.009
project.tests.query.test_query_taxon_tree.TestQ... test_get_ids_by_name project/tests/query/test_qu... 44 Pass 0.872
project.tests.query.test_query_metabolites_meta... test_get_ids_from_hash project/tests/query/test_qu... 52 Pass 0.031
project.tests.query.test_query_metabolites_meta... test_get_ids_from_hashes project/tests/query/test_qu... 60 Pass 0.417
project.tests.query.test_query_protein.TestQuer... test_get_id_by_name project/tests/query/test_qu... 156 Pass 0.003
project.tests.query.test_full_text_query.TestFTX test_get_index_in_page project/tests/query/test_fu... 109 Skipped 1.480
project.tests.query.test_query_sabiork_old.Test... test_get_info_by_entryid project/tests/query/test_qu... 101 Pass 0.090
project.tests.query.test_query_protein.TestQuer... test_get_info_by_ko project/tests/query/test_qu... 146 Pass 0.003
project.tests.query.test_query_protein.TestQuer... test_get_info_by_ko_abundance project/tests/query/test_qu... 151 Pass 0.003
project.tests.query.test_query_protein.TestQuer... test_get_info_by_taxonid project/tests/query/test_qu... 134 Pass 0.504
project.tests.query.test_query_protein.TestQuer... test_get_info_by_taxon_id_a... project/tests/query/test_qu... 140 Pass 0.504
project.tests.query.test_query_protein.TestQuer... test_get_info_by_text project/tests/query/test_qu... 124 Pass 0.004
project.tests.query.test_query_protein.TestQuer... test_get_info_by_text_abund... project/tests/query/test_qu... 129 Pass 0.003
project.tests.query.test_query_protein.TestQuer... test_get_kegg_orthology project/tests/query/test_qu... 243 Pass 0.005
project.tests.query.test_query_sabiork.TestQuer... test_get_kinlawid_by_inchi project/tests/query/test_qu... 47 Pass 1.484
project.tests.query.test_query_sabiork.TestQuer... test_get_kinlawid_by_name project/tests/query/test_qu... 63 Pass 0.880
project.tests.query.test_query_sabiork.TestQuer... test_get_kinlawid_by_rxn project/tests/query/test_qu... 56 Pass 0.266
project.tests.query.test_query_sabiork_old.Test... test_get_kinlawid_by_rxn project/tests/query/test_qu... 60 Pass 1.014
project.tests.query.test_query_sabiork_old.Test... test_get_kinlaw_by_entryid project/tests/query/test_qu... 96 Pass 0.005
project.tests.query.test_query_sabiork.TestQuer... test_get_kinlaw_by_environment project/tests/query/test_qu... 74 Pass 3.457
project.tests.query.test_query_sabiork_old.Test... test_get_kinlaw_by_environment project/tests/query/test_qu... 31 Pass 1.092
project.tests.query.test_query_protein.TestQuer... test_get_kinlaw_by_id project/tests/query/test_qu... 161 Pass 0.003
project.tests.query.test_query_protein.TestQuer... test_get_kinlaw_by_name project/tests/query/test_qu... 168 Pass 0.009
project.tests.query.test_query_sabiork_old.Test... test_get_kinlaw_by_rxn project/tests/query/test_qu... 76 Pass 2.414
project.tests.query.test_query_sabiork_old.Test... test_get_kinlaw_by_rxn_name project/tests/query/test_qu... 111 Pass 1.558
project.tests.query.test_query_kegg_orthology.T... test_get_ko_by_name project/tests/query/test_qu... 31 Pass 0.015
project.tests.query.test_query_metabolites_meta... test_get_metabolite_hashed_... project/tests/query/test_qu... 80 Pass 0.014
project.tests.query.test_query_metabolites_meta... test_get_metabolite_inchi project/tests/query/test_qu... 44 Pass 0.007
project.tests.query.test_query_metabolites_meta... test_get_metabolite_name_by... project/tests/query/test_qu... 70 Pass 0.008
project.tests.query.test_query_metabolites_meta... test_get_metabolite_similar... project/tests/query/test_qu... 90 Pass 2.558
project.tests.query.test_query_metabolites_meta... test_get_metabolite_synonyms project/tests/query/test_qu... 27 Pass 0.015
project.tests.query.test_query_protein.TestQuer... test_get_meta_by_name_name project/tests/query/test_qu... 118 Pass 0.205
project.tests.query.test_query_protein.TestQuer... test_get_meta_by_name_taxon project/tests/query/test_qu... 109 Pass 0.005
project.tests.query.test_query_metabolites.Test... test_get_meta_from_inchis project/tests/query/test_qu... 44 Pass 0.555
project.tests.query.test_query_taxon_tree.TestQ... test_get_name_by_id project/tests/query/test_qu... 39 Pass 0.004
project.tests.query.test_full_text_query.TestFTX test_get_num_source project/tests/query/test_fu... 90 Skipped 0.001
project.tests.query.test_query_protein.TestQuer... test_get_protein_meta project/tests/query/test_qu... 100 Pass 0.007
project.tests.query.test_query_protein.TestQuer... test_get_proximity_abundanc... project/tests/query/test_qu... 186 Pass 0.011
project.tests.query.test_query_taxon_tree.TestQ... test_get_rank project/tests/query/test_qu... 76 Pass 0.031
project.tests.query.test_query_sabiork.TestQuer... test_get_reaction_doc project/tests/query/test_qu... 30 Pass 0.009
project.tests.query.test_query_sabiork_old.Test... test_get_reaction_doc project/tests/query/test_qu... 54 Pass 0.010
project.tests.query.test_query_protein.TestQuer... test_get_uniprot_by_ko project/tests/query/test_qu... 220 Pass 0.035
project.tests.query.test_query_basic_users.Test... test_get_userid_from_username project/tests/query/test_qu... 34 Pass 0.041
project.tests.query.test_query_basic_users.Test... test_get_username_from_id project/tests/query/test_qu... 29 Pass 0.034
project.tests.util.test_file_util.TestFileUtil test_get_val_from_dict_list project/tests/util/test_fil... 42 Pass 0.001
project.tests.util.test_chem_util.TestChemUtil test_hash_inchi project/tests/util/test_che... 24 Pass 0.001
project.tests.test_main.CliTestCase test_help project/tests/test_main.py 25 Pass 0.009
project.tests.util.test_mongo_util.TestMongoUtil test_list_all_collections project/tests/util/test_mon... 31 Pass 0.025
project.tests.util.test_file_util.TestFileUtil test_make_dict project/tests/util/test_fil... 94 Pass 0.001
project.tests.util.test_file_util.TestFileUtil test_merge_dict project/tests/util/test_fil... 116 Pass 0.001
project.tests.config.test_query_manager.TestQue... test_metabolite_manager project/tests/config/test_q... 23 Pass 0.006
project.tests.util.test_chem_util.TestChemUtil test_morphineInChIKey project/tests/util/test_che... 30 Pass 0.001
project.tests.util.test_mongo_util.TestMongoUtil test_print_schema project/tests/util/test_mon... 42 Pass 0.009
project.tests.config.test_config.TestConfig test_prod_config project/tests/config/test_c... 23 Pass 0.001
project.tests.config.test_query_manager.TestQue... test_protein_manager project/tests/config/test_q... 19 Pass 0.005
project.tests.query.test_query_sabio_compound.T... test_query_sabio_compound project/tests/query/test_qu... 32 Pass 0.097
project.tests.util.test_file_util.TestFileUtil test_replace_dict_key project/tests/util/test_fil... 62 Pass 0.001
project.tests.query.test_full_text_query.TestFTX test_request_body_search project/tests/query/test_fu... 55 Skipped 0.001
project.tests.config.test_query_manager.TestFtx... test_rxn_manager project/tests/config/test_q... 60 Pass 0.147
project.tests.config.test_query_manager.TestRxn... test_rxn_manager project/tests/config/test_q... 38 Pass 0.006
project.tests.config.test_query_manager.TestTax... test_rxn_manager project/tests/config/test_q... 49 Pass 0.002
project.tests.util.test_file_util.TestFileUtil test_search_dict_index project/tests/util/test_fil... 68 Pass 0.001
project.tests.util.test_file_util.TestFileUtil test_search_dict_list project/tests/util/test_fil... 101 Pass 0.001
project.tests.query.test_full_text_query.TestFTX test_simple_query_string project/tests/query/test_fu... 67 Pass 0.073
project.tests.query.test_full_text_query.TestFTX test_simple_query_string_real project/tests/query/test_fu... 81 Skipped 0.070
project.tests.util.test_chem_util.TestChemUtil test_simplify_inchi project/tests/util/test_che... 18 Pass 0.001
project.tests.config.test_config.TestConfig test_test_config project/tests/config/test_c... 27 Pass 0.001
project.tests.util.test_file_util.TestFileUtil test_unpack_list project/tests/util/test_fil... 50 Pass 0.001
project.tests.test_main.CliTestCase test_version project/tests/test_main.py 30 Pass 0.391