KarrLab / h1_hesc / #2517

Info

Statistics

  • Reports: 1
  • Test classes: 40
  • Test cases: 60
  • Pass rate (%): 100.0
  • Average time (s): 713.86

Reports

Build Report Branch Revision Date Tests Passes Skips Failures Errors Time (s) % Pass
2517 3.6.8 master 3367... 2019-11-24 17:48:29 82 64 18 0 0 713.860
100.0

Test cases

Class Case File Line Test Pass Skip Fail Error Time (s) % Pass
tests.cell_cycle.test_hybrid_model_rules.TestCase test tests/cell_cycle/test_hybrid_model_rules.py 5 1 1 0 0 0 2.779
100.0
tests.code.cell_cycle.test_cell_cycle.TestCellCycle test tests/code/cell_cycle/test_cell_cycle.py 24 1 1 0 0 0 6.846
100.0
tests.model.hesc_recon.test_hesc_recon_to_wc_data_model.TestCase test tests/model/hesc_recon/test_hesc_recon_to_wc_data_model.py 5 1 0 1 0 0 19.279
100.0
tests.test_api.ApiTestCase test tests/test_api.py 15 1 1 0 0 0 0.001
100.0
tests.code.model.fba_simulation.test_metabolite_test.MetaboliteTest test_add_metabolite_as_objective tests/code/model/fba_simulation/test_metabolite_test.py 46 1 1 0 0 0 0.017
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_adjust_bounds tests/code/model/fba_simulation/test_model_setting.py 130 1 1 0 0 0 0.013
100.0
tests.code.kb_gen.test_api.TestApi test_api tests/code/kb_gen/test_api.py 15 1 1 0 0 0 0.001
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_block_all_exchange_reactions tests/code/model/fba_simulation/test_model_setting.py 63 1 1 0 0 0 0.013
100.0
tests.test_utils.UtilTest test_calc_eff_vmax tests/test_utils.py 92 1 1 0 0 0 0.001
100.0
tests.test_utils.UtilTest test_calc_median_kcat tests/test_utils.py 81 1 1 0 0 0 0.001
100.0
tests.model.cell_cycle.test_cyclin_dynamics.TestInitialRate_dM test_calc_reaction_rates_dM tests/model/cell_cycle/test_cyclin_dynamics.py 64 1 0 1 0 0 0.001
100.0
tests.model.cell_cycle.test_exponential_growth_in_M.TestInitialRate_dM test_calc_reaction_rates_dM tests/model/cell_cycle/test_exponential_growth_in_M.py 61 1 0 1 0 0 0.001
100.0
tests.model.hesc_recon.test_hesc_recon_cobra.ModelTest test_cobra_model tests/model/hesc_recon/test_hesc_recon_cobra.py 24 1 0 1 0 0 0.001
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_convert_model_for_optim tests/code/model/fba_simulation/test_model_setting.py 157 1 1 0 0 0 0.012
100.0
tests.cell_cycle.test_sbml_to_wc_lang.ConstructorTestCase test_create_model tests/cell_cycle/test_sbml_to_wc_lang.py 53 1 1 0 0 0 2.420
100.0
tests.test_utils.UtilTest test_eval_gene_reaction_rule tests/test_utils.py 60 1 1 0 0 0 0.002
100.0
tests.model.cell_cycle.test_cyclin_dynamics.TestExponentialGrowth_M test_exponential_growth_in_M tests/model/cell_cycle/test_cyclin_dynamics.py 91 1 0 1 0 0 0.001
100.0
tests.model.cell_cycle.test_exponential_growth_in_M.TestExponentialGrowth_M test_exponential_growth_in_M tests/model/cell_cycle/test_exponential_growth_in_M.py 88 1 0 1 0 0 0.001
100.0
tests.code.model.fba_simulation.test_metabolite_test.MetaboliteTest test_extract_biomass_components tests/code/model/fba_simulation/test_metabolite_test.py 40 1 1 0 0 0 0.008
100.0
tests.test_utils.UtilTest test_extract_info_from_string tests/test_utils.py 207 1 1 0 0 0 0.001
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_flux_variability_analysis tests/model/fba_simulation/test_model_simulation.py 201 1 0 1 0 0 0.001
100.0
tests.code.kb_gen.test_genes_transcripts_exons_proteins.Test test_generate_chunks tests/code/kb_gen/test_genes_transcripts_exons_proteins.py 160 1 1 0 0 0 0.002
100.0
tests.code.kb_gen.test_core.TestCase test_generator tests/code/kb_gen/test_core.py 25 1 1 0 0 0 0.010
100.0
tests.code.kb_gen.test_metabolic_reaction_kinetics.Test test_gen_components tests/code/kb_gen/test_metabolic_reaction_kinetics.py 319 1 1 0 0 0 58.796
100.0
tests.code.model_gen.test_complexation_option.TestComplexationOptionGenerator test_gen_options tests/code/model_gen/test_complexation_option.py 16 1 1 0 0 0 0.002
100.0
tests.code.model_gen.test_initialize_model_option.TestInitializeModelOptionGenerator test_gen_options tests/code/model_gen/test_initialize_model_option.py 20 1 1 0 0 0 0.009
100.0
tests.code.model_gen.test_protein_degradation_option.TestProteinDegradationOptionGenerator test_gen_options tests/code/model_gen/test_protein_degradation_option.py 16 1 1 0 0 0 0.002
100.0
tests.code.model_gen.test_rna_degradation_option.TestRnaDegradationOptionGenerator test_gen_options tests/code/model_gen/test_rna_degradation_option.py 16 1 1 0 0 0 0.002
100.0
tests.code.model_gen.test_transcription_option.TestTranscriptionOptionGenerator test_gen_options tests/code/model_gen/test_transcription_option.py 16 1 1 0 0 0 0.002
100.0
tests.model.hesc_recon.test_hesc_recon_cobra.ProtCalculateTest test_get_aminoacid_content tests/model/hesc_recon/test_hesc_recon_cobra.py 141 1 1 0 0 0 0.803
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_get_bounds_for_media tests/model/fba_simulation/test_model_simulation.py 37 1 0 1 0 0 0.001
100.0
tests.test_utils.UtilTest test_get_complexes_from_gene_rule tests/test_utils.py 105 1 1 0 0 0 0.004
100.0
tests.cell_cycle.test_sbml_to_wc_lang.ConstructorTestCase test_get_data tests/cell_cycle/test_sbml_to_wc_lang.py 112 1 1 0 0 0 2.455
100.0
tests.code.kb_gen.test_metabolic_reaction_kinetics.Test test_get_data tests/code/kb_gen/test_metabolic_reaction_kinetics.py 35 1 1 0 0 0 60.262
100.0
tests.test_utils.UtilTest test_get_enzyme_equation tests/test_utils.py 186 1 1 0 0 0 0.507
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_get_kinetic_bounds tests/model/fba_simulation/test_model_simulation.py 55 1 0 1 0 0 0.001
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_get_non_active_reactions tests/model/fba_simulation/test_model_simulation.py 46 1 0 1 0 0 0.001
100.0
tests.cell_cycle.test_sbml_to_wc_lang.ConstructorTestCase test_get_parameters tests/cell_cycle/test_sbml_to_wc_lang.py 50 1 1 0 0 0 0.001
100.0
tests.model.hesc_recon.test_hesc_recon_cobra.ProtCalculateTest test_get_protein_abundance tests/model/hesc_recon/test_hesc_recon_cobra.py 118 1 1 0 0 0 34.904
100.0
tests.cell_cycle.test_sbml_to_wc_lang.ConstructorTestCase test_get_reactions tests/cell_cycle/test_sbml_to_wc_lang.py 47 1 1 0 0 0 0.001
100.0
tests.test_utils.UtilTest test_get_reaction_equation tests/test_utils.py 168 1 1 0 0 0 0.001
100.0
tests.cell_cycle.test_sbml_to_wc_lang.ConstructorTestCase test_get_species tests/cell_cycle/test_sbml_to_wc_lang.py 44 1 1 0 0 0 0.001
100.0
tests.test_utils.UtilTest test_get_value_inchi_formula_connectivity tests/test_utils.py 221 1 1 0 0 0 0.001
100.0
tests.test_main.CliTestCase test_get_version tests/test_main.py 45 1 1 0 0 0 0.015
100.0
tests.code.model_gen.test_core.TestH1ModelGenerator test_H1ModelGenerator tests/code/model_gen/test_core.py 18 1 1 0 0 0 0.003
100.0
tests.test_utils.UtilTest test_has_all_inchi_structures tests/test_utils.py 158 1 1 0 0 0 0.001
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_linear_optimization tests/model/fba_simulation/test_model_simulation.py 102 1 0 1 0 0 0.001
100.0
tests.code.kb_gen.test_core.TestCase test_main tests/code/kb_gen/test_core.py 87 1 1 0 0 0 2.661
100.0
tests.code.model_gen.test_main.TestCase test_main tests/code/model_gen/test_main.py 20 1 1 0 0 0 22.445
100.0
tests.code.model_sim.test_sim_main.TestCase test_main tests/code/model_sim/test_sim_main.py 25 1 1 0 0 0 20.179
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_metabolite_testing tests/model/fba_simulation/test_model_simulation.py 72 1 0 1 0 0 0.001
100.0
tests.code.kb_gen.test_chromosomes.Test test_methods tests/code/kb_gen/test_chromosomes.py 28 1 1 0 0 0 0.005
100.0
tests.code.kb_gen.test_compartments.CompartmentsGeneratorTestCase test_methods tests/code/kb_gen/test_compartments.py 20 1 1 0 0 0 0.005
100.0
tests.code.kb_gen.test_complexes.Test test_methods tests/code/kb_gen/test_complexes.py 23 1 1 0 0 0 58.779
100.0
tests.code.kb_gen.test_genes_transcripts_exons_proteins.Test test_methods tests/code/kb_gen/test_genes_transcripts_exons_proteins.py 23 1 0 1 0 0 0.001
100.0
tests.code.kb_gen.test_metabolic_network.Test test_methods tests/code/kb_gen/test_metabolic_network.py 23 1 1 0 0 0 99.051
100.0
tests.code.kb_gen.test_metabolites.MetabolitesGeneratorTestCase test_methods tests/code/kb_gen/test_metabolites.py 23 1 1 0 0 0 7.930
100.0
tests.code.kb_gen.test_properties.PropertiesGeneratorTestCase test_methods tests/code/kb_gen/test_properties.py 24 1 1 0 0 0 0.260
100.0
tests.code.kb_gen.test_protein_modifications.ProteinModificationsGeneratorTestCase test_methods tests/code/kb_gen/test_protein_modifications.py 18 1 1 0 0 0 57.102
100.0
tests.code.kb_gen.test_proteins.Test test_methods tests/code/kb_gen/test_proteins.py 22 1 1 0 0 0 72.095
100.0
tests.code.kb_gen.test_regulatory_modules.Test test_methods tests/code/kb_gen/test_regulatory_modules.py 21 1 1 0 0 0 54.199
100.0
tests.code.kb_gen.test_transcripts.Test test_methods tests/code/kb_gen/test_transcripts.py 23 1 1 0 0 0 58.048
100.0
tests.code.model.fba_simulation.test_metabolite_test.MetaboliteTest test_mock_run_metabolite_test tests/code/model/fba_simulation/test_metabolite_test.py 56 1 1 0 0 0 0.034
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_model_for_recalibration tests/code/model/fba_simulation/test_model_setting.py 170 1 1 0 0 0 0.013
100.0
tests.code.model_gen.test_core.TestOptionGenerator test_option_component_generator tests/code/model_gen/test_core.py 51 1 1 0 0 0 0.001
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_ori_state_comments tests/code/model/fba_simulation/test_model_setting.py 55 1 1 0 0 0 0.011
100.0
tests.test_utils.UtilTest test_parse_cobra_reaction_equation tests/test_utils.py 47 1 1 0 0 0 0.001
100.0
tests.code.kb_gen.test_metabolic_reaction_kinetics.Test test_process_data tests/code/kb_gen/test_metabolic_reaction_kinetics.py 122 1 1 0 0 0 71.734
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_quadratic_optimization tests/model/fba_simulation/test_model_simulation.py 126 1 0 1 0 0 0.001
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_raiseValueError tests/code/model/fba_simulation/test_model_setting.py 208 1 1 0 0 0 0.012
100.0
tests.test_main.CliTestCase test_raw_cli tests/test_main.py 18 1 1 0 0 0 0.032
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_recalibrate_model tests/model/fba_simulation/test_model_simulation.py 152 1 0 1 0 0 0.001
100.0
tests.test_utils.UtilTest test_remove_inchi_layer tests/test_utils.py 23 1 1 0 0 0 0.001
100.0
tests.code.kb_gen.test_taxon.TaxonGeneratorTestCase test_run tests/code/kb_gen/test_taxon.py 17 1 1 0 0 0 0.002
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_scale_bounds tests/code/model/fba_simulation/test_model_setting.py 115 1 1 0 0 0 0.016
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_sensitivity_analysis tests/model/fba_simulation/test_model_simulation.py 186 1 0 1 0 0 0.001
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_set_bounds_for_media tests/code/model/fba_simulation/test_model_setting.py 72 1 1 0 0 0 0.012
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_set_bound_type tests/model/fba_simulation/test_model_simulation.py 59 1 0 1 0 0 0.001
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_set_kinetic_bounds tests/code/model/fba_simulation/test_model_setting.py 102 1 1 0 0 0 0.012
100.0
tests.model.fba_simulation.test_model_simulation.SimTest test_single_cell_simulation tests/model/fba_simulation/test_model_simulation.py 247 1 0 1 0 0 0.001
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_switch_off_non_active_reactions tests/code/model/fba_simulation/test_model_setting.py 92 1 1 0 0 0 0.012
100.0
tests.code.model.fba_simulation.test_model_setting.SetTest test_use_input_bounds tests/code/model/fba_simulation/test_model_setting.py 146 1 1 0 0 0 0.013
100.0